NIEM Wayfarer 5.1

Disclaimer: This tool was developed by Tom Carlson Consulting LLC. It was created from the official distribution of the data model. Tom Carlson Consulting LLC makes neither claim nor warranty that this tool provides an accurate representation of the NIEM data model. For official and authoritative representations, please visit the official NIEM release website. Non-English text Powered by Google Translate.

for

biom:DNAAllele (biom:DNAAlleleType)

A description of a DNA fragment data that occupies a given locus (position) on a chromosome and detected in a polymorphic system. An individual's genotype for that gene is the set of alleles it happens to possess.

View UML for type: biom:DNAAlleleType

biom:DNAAllele is contained within these types:
biom:DNAAllele can contain:
  • biom:DNAAlleleOperatorCode
        A symbol or function on the allele call value(s), e.g. equal, range, etc.
  • biom:DNAAlleleCall1Text
        A description of the allele call, e.g. "X" or "Y" for an allele of locus Amelogenin, or the number of repeat units for an allele of locus CSF1PO.
  • biom:DNAAlleleCall2Text
        A number of repeat units in the allele call, used only if the DNAAlleleOperatorCode is "Range"
  • biom:DNAAllelePeakHeightValue
        An allele peak height in relative fluorescent units (RFUs), can be a negative or positive integer
  • biom:DNAAlleleRequiredIndicator
        True if this allele [in a mixture] is a required allele for searching; false otherwise. The indicator is used when the mixture cannot be deduced to a single-source profile, but this allele may be attributable to the perpetrator after using victim alleles to isolate alleles coming from unknown source.
biom:DNAAllele can be contained in any of these elements:
Everything biom:DNAAllele can contain:
  • via biom:DNAAlleleType
    • biom:DNAAlleleOperatorCode A symbol or function on the allele call value(s), e.g. equal, range, etc.
    • biom:DNAAlleleCall1Text A description of the allele call, e.g. "X" or "Y" for an allele of locus Amelogenin, or the number of repeat units for an allele of locus CSF1PO.
    • biom:DNAAlleleCall2Text A number of repeat units in the allele call, used only if the DNAAlleleOperatorCode is "Range"
    • biom:DNAAllelePeakHeightValue An allele peak height in relative fluorescent units (RFUs), can be a negative or positive integer
    • biom:DNAAlleleRequiredIndicator True if this allele [in a mixture] is a required allele for searching; false otherwise. The indicator is used when the mixture cannot be deduced to a single-source profile, but this allele may be attributable to the perpetrator after using victim alleles to isolate alleles coming from unknown source.
  • via structures:ObjectType
    • Nothing